Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20■□□□□ 0.79
PDE6BP35913 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 U82695.1-201ENST00000635752 1889 ntBASIC20■□□□□ 0.79
PDE6BP35913 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
PDE6BP35913 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.99■□□□□ 0.79
PDE6BP35913 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
PDE6BP35913 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PDE6BP35913 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.99■□□□□ 0.79
PDE6BP35913 FAM21FP-201ENST00000426241 1131 ntBASIC19.99■□□□□ 0.79
PDE6BP35913 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.99■□□□□ 0.79
PDE6BP35913 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.99■□□□□ 0.79
PDE6BP35913 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.99■□□□□ 0.79
PDE6BP35913 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 AC005622.1-201ENST00000636801 1703 ntBASIC19.99■□□□□ 0.79
PDE6BP35913 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6BP35913 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.98■□□□□ 0.79
PDE6BP35913 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.98■□□□□ 0.79
PDE6BP35913 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PDE6BP35913 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDE6BP35913 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.98■□□□□ 0.79
PDE6BP35913 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 AC005229.1-201ENST00000392885 409 ntBASIC19.98■□□□□ 0.79
PDE6BP35913 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.98■□□□□ 0.79
PDE6BP35913 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.98■□□□□ 0.79
PDE6BP35913 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.98■□□□□ 0.79
PDE6BP35913 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.98■□□□□ 0.79
PDE6BP35913 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.98■□□□□ 0.79
PDE6BP35913 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.98■□□□□ 0.79
PDE6BP35913 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PDE6BP35913 PCGF3-213ENST00000620529 1899 ntBASIC19.98■□□□□ 0.79
PDE6BP35913 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6BP35913 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PDE6BP35913 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 HAUS4P1-201ENST00000406739 1145 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.97■□□□□ 0.79
PDE6BP35913 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 RPL7P3-201ENST00000441388 714 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 BCRP2-202ENST00000447763 634 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.97■□□□□ 0.79
PDE6BP35913 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.97■□□□□ 0.79
PDE6BP35913 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.97■□□□□ 0.79
PDE6BP35913 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.97■□□□□ 0.79
PDE6BP35913 BCRP6-201ENST00000510112 632 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 BCRP7-201ENST00000511549 544 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 ENPP7P5-201ENST00000541031 1031 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 AC103810.3-201ENST00000583567 96 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 BRI3BPP1-201ENST00000594224 787 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.97■□□□□ 0.79
PDE6BP35913 AC068587.10-201ENST00000641210 219 ntBASIC19.97■□□□□ 0.79
PDE6BP35913 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDE6BP35913 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms