Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX1P22670 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX1P22670 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
RFX1P22670 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX1P22670 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RFX1P22670 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RFX1P22670 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX1P22670 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX1P22670 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RFX1P22670 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RFX1P22670 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RFX1P22670 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.85■□□□□ 0.45
RFX1P22670 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RFX1P22670 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.85■□□□□ 0.45
RFX1P22670 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 INGX-202ENST00000489074 768 ntBASIC17.85■□□□□ 0.45
RFX1P22670 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 AC067863.1-201ENST00000494933 530 ntBASIC17.85■□□□□ 0.45
RFX1P22670 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.85■□□□□ 0.45
RFX1P22670 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.85■□□□□ 0.45
RFX1P22670 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 AC005498.2-205ENST00000593218 784 ntBASIC17.85■□□□□ 0.45
RFX1P22670 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 AL031055.1-201ENST00000606362 631 ntBASIC17.85■□□□□ 0.45
RFX1P22670 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.85■□□□□ 0.45
RFX1P22670 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFX1P22670 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFX1P22670 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX1P22670 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX1P22670 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RFX1P22670 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RFX1P22670 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RFX1P22670 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RFX1P22670 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX1P22670 HMGA1P7-201ENST00000406908 502 ntBASIC17.84■□□□□ 0.45
RFX1P22670 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX1P22670 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX1P22670 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.84■□□□□ 0.45
RFX1P22670 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.84■□□□□ 0.45
RFX1P22670 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX1P22670 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RFX1P22670 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 AL596087.1-201ENST00000400979 1969 ntBASIC17.84■□□□□ 0.45
RFX1P22670 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX1P22670 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX1P22670 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RFX1P22670 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX1P22670 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX1P22670 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.83■□□□□ 0.45
RFX1P22670 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.83■□□□□ 0.45
RFX1P22670 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX1P22670 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.83■□□□□ 0.45
RFX1P22670 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX1P22670 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX1P22670 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX1P22670 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.83■□□□□ 0.45
RFX1P22670 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.83■□□□□ 0.44
RFX1P22670 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms