Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.84■□□□□ 0.13
CAPN3P20807 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 SLC25A6P2-201ENST00000497974 877 ntBASIC15.83■□□□□ 0.12
CAPN3P20807 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.83■□□□□ 0.12
CAPN3P20807 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CAPN3P20807 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.83■□□□□ 0.12
CAPN3P20807 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.83■□□□□ 0.12
CAPN3P20807 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CAPN3P20807 AL139288.1-201ENST00000623748 933 ntBASIC15.83■□□□□ 0.12
CAPN3P20807 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CAPN3P20807 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.83■□□□□ 0.12
CAPN3P20807 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN3P20807 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN3P20807 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CAPN3P20807 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN3P20807 AC145285.3-201ENST00000564603 959 ntBASIC15.82■□□□□ 0.12
CAPN3P20807 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.82■□□□□ 0.12
CAPN3P20807 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN3P20807 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.82■□□□□ 0.12
CAPN3P20807 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CAPN3P20807 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.82■□□□□ 0.12
CAPN3P20807 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CAPN3P20807 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN3P20807 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms