Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD58P19256 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD58P19256 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CD58P19256 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD58P19256 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD58P19256 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CD58P19256 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD58P19256 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.62■□□□□ 0.41
CD58P19256 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD58P19256 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.62■□□□□ 0.41
CD58P19256 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.62■□□□□ 0.41
CD58P19256 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CD58P19256 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CD58P19256 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.61■□□□□ 0.41
CD58P19256 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 AC005622.1-201ENST00000636801 1703 ntBASIC17.61■□□□□ 0.41
CD58P19256 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.61■□□□□ 0.41
CD58P19256 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.61■□□□□ 0.41
CD58P19256 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CD58P19256 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CD58P19256 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
CD58P19256 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CD58P19256 RN7SL589P-201ENST00000481268 310 ntBASIC17.61■□□□□ 0.41
CD58P19256 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
CD58P19256 AC079140.1-201ENST00000508039 487 ntBASIC17.61■□□□□ 0.41
CD58P19256 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.61■□□□□ 0.41
CD58P19256 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.61■□□□□ 0.41
CD58P19256 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.61■□□□□ 0.41
CD58P19256 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.61■□□□□ 0.41
CD58P19256 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.61■□□□□ 0.41
CD58P19256 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.61■□□□□ 0.41
CD58P19256 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.61■□□□□ 0.41
CD58P19256 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.61■□□□□ 0.41
CD58P19256 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CD58P19256 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 LINC02199-201ENST00000506655 2702 ntBASIC17.61■□□□□ 0.41
CD58P19256 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CD58P19256 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD58P19256 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CD58P19256 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.6■□□□□ 0.41
CD58P19256 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.6■□□□□ 0.41
CD58P19256 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.6■□□□□ 0.41
CD58P19256 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 PRYP6-201ENST00000514804 343 ntBASIC17.6■□□□□ 0.41
CD58P19256 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.6■□□□□ 0.41
CD58P19256 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.6■□□□□ 0.41
CD58P19256 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.6■□□□□ 0.41
CD58P19256 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.6■□□□□ 0.41
CD58P19256 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD58P19256 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD58P19256 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms