Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
GAP43P17677 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.05■□□□□ 0.48
GAP43P17677 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
GAP43P17677 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.05■□□□□ 0.48
GAP43P17677 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.05■□□□□ 0.48
GAP43P17677 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.05■□□□□ 0.48
GAP43P17677 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 AC245100.5-201ENST00000452108 331 ntBASIC18.05■□□□□ 0.48
GAP43P17677 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.05■□□□□ 0.48
GAP43P17677 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
GAP43P17677 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.05■□□□□ 0.48
GAP43P17677 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.05■□□□□ 0.48
GAP43P17677 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.05■□□□□ 0.48
GAP43P17677 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
GAP43P17677 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.05■□□□□ 0.48
GAP43P17677 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.05■□□□□ 0.48
GAP43P17677 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
GAP43P17677 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
GAP43P17677 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.04■□□□□ 0.48
GAP43P17677 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GAP43P17677 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GAP43P17677 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.04■□□□□ 0.48
GAP43P17677 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.04■□□□□ 0.48
GAP43P17677 AC069335.1-201ENST00000489972 472 ntBASIC18.04■□□□□ 0.48
GAP43P17677 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.04■□□□□ 0.48
GAP43P17677 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.04■□□□□ 0.48
GAP43P17677 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.04■□□□□ 0.48
GAP43P17677 MIR4321-201ENST00000592276 80 ntBASIC18.04■□□□□ 0.48
GAP43P17677 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GAP43P17677 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.04■□□□□ 0.48
GAP43P17677 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
GAP43P17677 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.04■□□□□ 0.48
GAP43P17677 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GAP43P17677 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GAP43P17677 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.03■□□□□ 0.48
GAP43P17677 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.03■□□□□ 0.48
GAP43P17677 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
GAP43P17677 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.03■□□□□ 0.48
GAP43P17677 AP000344.2-201ENST00000512987 629 ntBASIC18.03■□□□□ 0.48
GAP43P17677 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.03■□□□□ 0.48
GAP43P17677 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 AC024267.1-201ENST00000582320 895 ntBASIC18.03■□□□□ 0.48
GAP43P17677 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAP43P17677 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
GAP43P17677 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GAP43P17677 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GAP43P17677 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.02■□□□□ 0.48
GAP43P17677 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GAP43P17677 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAP43P17677 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.02■□□□□ 0.48
GAP43P17677 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.02■□□□□ 0.48
GAP43P17677 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAP43P17677 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.02■□□□□ 0.48
GAP43P17677 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms