Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KRT3P12035 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT3P12035 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT3P12035 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT3P12035 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT3P12035 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT3P12035 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
KRT3P12035 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT3P12035 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT3P12035 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 AC023274.1-201ENST00000418278 595 ntBASIC17.29■□□□□ 0.36
KRT3P12035 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT3P12035 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT3P12035 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT3P12035 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 WASH6P-202ENST00000359512 1437 ntBASIC17.29■□□□□ 0.36
KRT3P12035 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT3P12035 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT3P12035 U82695.1-201ENST00000635752 1889 ntBASIC17.29■□□□□ 0.36
KRT3P12035 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KRT3P12035 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
KRT3P12035 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.28■□□□□ 0.36
KRT3P12035 AC040169.1-201ENST00000565382 521 ntBASIC17.28■□□□□ 0.36
KRT3P12035 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
KRT3P12035 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KRT3P12035 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
KRT3P12035 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT3P12035 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms