Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 DUSP5P1-201ENST00000441325 1139 ntBASIC15.94■□□□□ 0.14
LINGO3P0C6S8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 STK19B-204ENST00000512515 211 ntBASIC15.94■□□□□ 0.14
LINGO3P0C6S8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 AC091304.2-201ENST00000564639 760 ntBASIC15.94■□□□□ 0.14
LINGO3P0C6S8 STK25P1-201ENST00000585406 838 ntBASIC15.94■□□□□ 0.14
LINGO3P0C6S8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 CICP20-201ENST00000443330 2801 ntBASIC15.94■□□□□ 0.14
LINGO3P0C6S8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINGO3P0C6S8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 AL359183.1-201ENST00000623796 2132 ntBASIC15.93■□□□□ 0.14
LINGO3P0C6S8 AP000867.4-201ENST00000641616 219 ntBASIC15.93■□□□□ 0.14
LINGO3P0C6S8 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.93■□□□□ 0.14
LINGO3P0C6S8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINGO3P0C6S8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINGO3P0C6S8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.92■□□□□ 0.14
LINGO3P0C6S8 AC107918.4-201ENST00000641966 3141 ntBASIC15.92■□□□□ 0.14
LINGO3P0C6S8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINGO3P0C6S8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms