Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.86■□□□□ 0.29
RHOP08100 AC092337.1-201ENST00000568699 1129 ntBASIC16.86■□□□□ 0.29
RHOP08100 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.86■□□□□ 0.29
RHOP08100 CTBP2P3-201ENST00000585629 1255 ntBASIC16.86■□□□□ 0.29
RHOP08100 AC025048.3-201ENST00000590609 569 ntBASIC16.86■□□□□ 0.29
RHOP08100 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.86■□□□□ 0.29
RHOP08100 AC005702.4-201ENST00000618393 416 ntBASIC16.86■□□□□ 0.29
RHOP08100 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.86■□□□□ 0.29
RHOP08100 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.86■□□□□ 0.29
RHOP08100 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RHOP08100 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.85■□□□□ 0.29
RHOP08100 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 AC105020.1-201ENST00000435356 2205 ntBASIC16.85■□□□□ 0.29
RHOP08100 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RHOP08100 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RHOP08100 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
RHOP08100 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RHOP08100 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RHOP08100 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.85■□□□□ 0.29
RHOP08100 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.85■□□□□ 0.29
RHOP08100 AC079776.1-201ENST00000401540 1152 ntBASIC16.85■□□□□ 0.29
RHOP08100 FO393414.2-201ENST00000405153 598 ntBASIC16.85■□□□□ 0.29
RHOP08100 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.85■□□□□ 0.29
RHOP08100 AC098850.1-201ENST00000419919 790 ntBASIC16.85■□□□□ 0.29
RHOP08100 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.85■□□□□ 0.29
RHOP08100 HIST3H2BA-201ENST00000436555 524 ntBASIC16.85■□□□□ 0.29
RHOP08100 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.85■□□□□ 0.29
RHOP08100 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.85■□□□□ 0.29
RHOP08100 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RHOP08100 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.85■□□□□ 0.29
RHOP08100 AC093726.1-201ENST00000608064 963 ntBASIC16.85■□□□□ 0.29
RHOP08100 AC017083.2-201ENST00000608069 979 ntBASIC16.85■□□□□ 0.29
RHOP08100 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RHOP08100 PKD1P1-201ENST00000458669 6805 ntBASIC16.85■□□□□ 0.29
RHOP08100 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.85■□□□□ 0.29
RHOP08100 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.85■□□□□ 0.29
RHOP08100 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.85■□□□□ 0.29
RHOP08100 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RHOP08100 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RHOP08100 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.84■□□□□ 0.29
RHOP08100 ACA64.2-201ENST00000459014 129 ntBASIC16.84■□□□□ 0.29
RHOP08100 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 TIMM17BP1-201ENST00000545713 516 ntBASIC16.84■□□□□ 0.29
RHOP08100 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.84■□□□□ 0.29
RHOP08100 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.84■□□□□ 0.29
RHOP08100 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RHOP08100 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.84■□□□□ 0.29
RHOP08100 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.84■□□□□ 0.29
RHOP08100 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.84■□□□□ 0.29
RHOP08100 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms