Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.85■□□□□ 0.29
TOP3BO95985 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.85■□□□□ 0.29
TOP3BO95985 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.85■□□□□ 0.29
TOP3BO95985 AC022494.1-201ENST00000466044 728 ntBASIC16.85■□□□□ 0.29
TOP3BO95985 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
TOP3BO95985 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.85■□□□□ 0.29
TOP3BO95985 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.85■□□□□ 0.29
TOP3BO95985 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.85■□□□□ 0.29
TOP3BO95985 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TOP3BO95985 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TOP3BO95985 TUBB8P12-201ENST00000308911 1335 ntBASIC16.85■□□□□ 0.29
TOP3BO95985 TUBB7P-202ENST00000428444 1305 ntBASIC16.85■□□□□ 0.29
TOP3BO95985 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.85■□□□□ 0.29
TOP3BO95985 TUBB8P7-204ENST00000567960 1332 ntBASIC16.85■□□□□ 0.29
TOP3BO95985 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TOP3BO95985 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP3BO95985 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.84■□□□□ 0.29
TOP3BO95985 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TOP3BO95985 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 AL020989.1-201ENST00000422979 469 ntBASIC16.84■□□□□ 0.29
TOP3BO95985 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.84■□□□□ 0.29
TOP3BO95985 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.84■□□□□ 0.29
TOP3BO95985 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.84■□□□□ 0.29
TOP3BO95985 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TOP3BO95985 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.84■□□□□ 0.29
TOP3BO95985 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TOP3BO95985 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP3BO95985 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.84■□□□□ 0.29
TOP3BO95985 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TOP3BO95985 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TOP3BO95985 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 OR8S1-201ENST00000310194 1080 ntBASIC16.83■□□□□ 0.28
TOP3BO95985 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP3BO95985 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP3BO95985 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TOP3BO95985 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP3BO95985 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP3BO95985 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TOP3BO95985 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TOP3BO95985 ACTG1P4-201ENST00000425123 1122 ntBASIC16.83■□□□□ 0.28
TOP3BO95985 AC055876.3-201ENST00000431496 288 ntBASIC16.83■□□□□ 0.28
TOP3BO95985 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP3BO95985 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.83■□□□□ 0.28
TOP3BO95985 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TOP3BO95985 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
TOP3BO95985 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.83■□□□□ 0.28
TOP3BO95985 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
TOP3BO95985 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.83■□□□□ 0.28
TOP3BO95985 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP3BO95985 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms