Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC106794.1-201ENST00000506935 792 ntBASIC7.17□□□□□ -1.26
USH2AO75445 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC7.17□□□□□ -1.26
USH2AO75445 RN7SL774P-201ENST00000577467 290 ntBASIC7.17□□□□□ -1.26
USH2AO75445 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 WIZP1-201ENST00000531444 2299 ntBASIC7.17□□□□□ -1.26
USH2AO75445 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
USH2AO75445 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
USH2AO75445 AC108860.2-201ENST00000562760 2183 ntBASIC7.17□□□□□ -1.26
USH2AO75445 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC7.17□□□□□ -1.26
USH2AO75445 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 AC022217.1-201ENST00000521069 738 ntBASIC7.16□□□□□ -1.26
USH2AO75445 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 CYGB-203ENST00000589145 788 ntTSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 YRDCP1-201ENST00000621419 643 ntBASIC7.16□□□□□ -1.26
USH2AO75445 AL805961.1-201ENST00000642026 753 ntBASIC7.16□□□□□ -1.26
USH2AO75445 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC7.16□□□□□ -1.26
USH2AO75445 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC7.16□□□□□ -1.26
USH2AO75445 SERPINA13P-202ENST00000478994 924 ntBASIC7.16□□□□□ -1.26
USH2AO75445 AC026410.3-201ENST00000514280 936 ntBASIC7.16□□□□□ -1.26
USH2AO75445 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 AL022344.2-201ENST00000568976 968 ntBASIC7.16□□□□□ -1.26
USH2AO75445 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 AC098818.2-201ENST00000564925 2320 ntBASIC7.16□□□□□ -1.26
USH2AO75445 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 RNF165-205ENST00000588679 2904 ntBASIC7.16□□□□□ -1.26
USH2AO75445 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 RPSAP36-202ENST00000494591 1261 ntBASIC7.16□□□□□ -1.26
USH2AO75445 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC7.16□□□□□ -1.26
USH2AO75445 AC120045.2-201ENST00000567334 178 ntBASIC7.16□□□□□ -1.26
USH2AO75445 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 TUBBP5-203ENST00000508529 1334 ntBASIC7.16□□□□□ -1.26
USH2AO75445 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC7.16□□□□□ -1.26
USH2AO75445 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC7.16□□□□□ -1.26
USH2AO75445 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC7.16□□□□□ -1.26
USH2AO75445 AL157792.1-201ENST00000488281 530 ntBASIC7.16□□□□□ -1.26
USH2AO75445 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 RNA5SP486-201ENST00000515961 83 ntBASIC7.16□□□□□ -1.26
USH2AO75445 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 PGAM1P5-201ENST00000548011 764 ntBASIC7.16□□□□□ -1.26
USH2AO75445 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 AC026979.3-201ENST00000607315 403 ntBASIC7.16□□□□□ -1.26
USH2AO75445 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC7.16□□□□□ -1.26
USH2AO75445 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
USH2AO75445 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC7.16□□□□□ -1.26
USH2AO75445 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 AC087289.5-201ENST00000586076 3175 ntBASIC7.16□□□□□ -1.26
USH2AO75445 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USH2AO75445 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
USH2AO75445 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC7.16□□□□□ -1.26
USH2AO75445 AC092053.1-201ENST00000605787 1936 ntBASIC7.16□□□□□ -1.26
USH2AO75445 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms