Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
EXTL3O43909 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXTL3O43909 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
EXTL3O43909 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.74■□□□□ 0.43
EXTL3O43909 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
EXTL3O43909 RNA5SP410-201ENST00000516285 106 ntBASIC17.74■□□□□ 0.43
EXTL3O43909 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 AC061975.2-201ENST00000581722 295 ntBASIC17.74■□□□□ 0.43
EXTL3O43909 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.74■□□□□ 0.43
EXTL3O43909 AC106028.4-201ENST00000614509 607 ntBASIC17.74■□□□□ 0.43
EXTL3O43909 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXTL3O43909 PCDH8P1-201ENST00000428983 2773 ntBASIC17.74■□□□□ 0.43
EXTL3O43909 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.74■□□□□ 0.43
EXTL3O43909 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.74■□□□□ 0.43
EXTL3O43909 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
EXTL3O43909 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.73■□□□□ 0.43
EXTL3O43909 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 SPDYE14P-201ENST00000442619 822 ntBASIC17.73■□□□□ 0.43
EXTL3O43909 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 HLA-J-203ENST00000494367 1087 ntBASIC17.73■□□□□ 0.43
EXTL3O43909 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.73■□□□□ 0.43
EXTL3O43909 AC026150.2-201ENST00000564693 1156 ntBASIC17.73■□□□□ 0.43
EXTL3O43909 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.73■□□□□ 0.43
EXTL3O43909 MIR4321-201ENST00000592276 80 ntBASIC17.73■□□□□ 0.43
EXTL3O43909 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.73■□□□□ 0.43
EXTL3O43909 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.73■□□□□ 0.43
EXTL3O43909 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.73■□□□□ 0.43
EXTL3O43909 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
EXTL3O43909 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 AL596087.1-201ENST00000400979 1969 ntBASIC17.73■□□□□ 0.43
EXTL3O43909 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXTL3O43909 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.72■□□□□ 0.43
EXTL3O43909 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.72■□□□□ 0.43
EXTL3O43909 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
EXTL3O43909 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.72■□□□□ 0.43
EXTL3O43909 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EXTL3O43909 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms