Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
YJEFN3A6XGL0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
YJEFN3A6XGL0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YJEFN3A6XGL0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YJEFN3A6XGL0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YJEFN3A6XGL0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YJEFN3A6XGL0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 AC006449.6-201ENST00000612330 2296 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 CNN2P2-201ENST00000443536 909 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 CNN2P3-201ENST00000450201 906 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 AC027796.2-201ENST00000575326 344 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 AC024267.1-201ENST00000582320 895 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 AC003101.2-201ENST00000612557 442 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 AC106028.4-201ENST00000614509 607 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 AL136317.3-201ENST00000618497 906 ntBASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.04■□□□□ 0.32
YJEFN3A6XGL0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 TUBB3P1-201ENST00000405796 1332 ntBASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 AC051619.7-201ENST00000568314 623 ntBASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 MIR4321-201ENST00000592276 80 ntBASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 AL365330.1-201ENST00000607459 531 ntBASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.03■□□□□ 0.32
YJEFN3A6XGL0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.02■□□□□ 0.32
YJEFN3A6XGL0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms