Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 POLD2P1-201ENST00000511220 997 ntBASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC162PA2VCL2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 KRT18P34-201ENST00000488218 1270 ntBASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 KRT18P58-201ENST00000527480 1120 ntBASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC162PA2VCL2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 LINC02199-201ENST00000506655 2702 ntBASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 AP000347.1-202ENST00000435868 847 ntBASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 PGAM5P1-201ENST00000518923 814 ntBASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 AL671883.3-201ENST00000603274 991 ntBASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 AC099522.2-201ENST00000607001 744 ntBASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 TCAF2P1-201ENST00000291129 2421 ntBASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms