Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.1□□□□□ -0.15
COL12A1Q99715 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL12A1Q99715 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
COL12A1Q99715 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL12A1Q99715 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
COL12A1Q99715 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL12A1Q99715 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL12A1Q99715 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL12A1Q99715 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.1□□□□□ -0.15
COL12A1Q99715 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL12A1Q99715 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL12A1Q99715 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.1□□□□□ -0.15
COL12A1Q99715 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.09□□□□□ -0.15
COL12A1Q99715 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
COL12A1Q99715 AC135983.4-201ENST00000564116 1262 ntBASIC14.09□□□□□ -0.15
COL12A1Q99715 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.09□□□□□ -0.15
COL12A1Q99715 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 AL451050.2-201ENST00000606967 682 ntBASIC14.09□□□□□ -0.15
COL12A1Q99715 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.09□□□□□ -0.15
COL12A1Q99715 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 AL355864.2-201ENST00000447420 863 ntBASIC14.09□□□□□ -0.15
COL12A1Q99715 SPTLC1P5-201ENST00000450718 252 ntBASIC14.09□□□□□ -0.15
COL12A1Q99715 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.09□□□□□ -0.15
COL12A1Q99715 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.09□□□□□ -0.15
COL12A1Q99715 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.09□□□□□ -0.15
COL12A1Q99715 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.09□□□□□ -0.15
COL12A1Q99715 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.09□□□□□ -0.15
COL12A1Q99715 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 AHCYP2-201ENST00000430630 1300 ntBASIC14.09□□□□□ -0.15
COL12A1Q99715 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.09□□□□□ -0.15
COL12A1Q99715 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL12A1Q99715 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.09□□□□□ -0.15
COL12A1Q99715 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.09□□□□□ -0.15
COL12A1Q99715 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.09□□□□□ -0.15
COL12A1Q99715 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
COL12A1Q99715 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.08□□□□□ -0.15
COL12A1Q99715 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
COL12A1Q99715 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
COL12A1Q99715 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.08□□□□□ -0.15
COL12A1Q99715 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.08□□□□□ -0.15
COL12A1Q99715 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.08□□□□□ -0.15
COL12A1Q99715 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.08□□□□□ -0.15
COL12A1Q99715 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
COL12A1Q99715 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
COL12A1Q99715 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.08□□□□□ -0.16
COL12A1Q99715 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
COL12A1Q99715 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
COL12A1Q99715 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
COL12A1Q99715 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL12A1Q99715 RNF165-205ENST00000588679 2904 ntBASIC14.08□□□□□ -0.16
COL12A1Q99715 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.08□□□□□ -0.16
COL12A1Q99715 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.08□□□□□ -0.16
COL12A1Q99715 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.08□□□□□ -0.16
COL12A1Q99715 EEF1DP6-201ENST00000449232 372 ntBASIC14.08□□□□□ -0.16
COL12A1Q99715 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.08□□□□□ -0.16
COL12A1Q99715 AC005702.4-201ENST00000618393 416 ntBASIC14.08□□□□□ -0.16
COL12A1Q99715 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
COL12A1Q99715 AC244452.3-201ENST00000636814 210 ntBASIC14.08□□□□□ -0.16
COL12A1Q99715 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.08□□□□□ -0.16
COL12A1Q99715 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL12A1Q99715 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.08□□□□□ -0.16
COL12A1Q99715 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL12A1Q99715 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL12A1Q99715 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL12A1Q99715 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL12A1Q99715 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
COL12A1Q99715 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
COL12A1Q99715 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.08□□□□□ -0.16
COL12A1Q99715 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL12A1Q99715 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.08□□□□□ -0.16
COL12A1Q99715 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.08□□□□□ -0.16
COL12A1Q99715 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.08□□□□□ -0.16
COL12A1Q99715 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.08□□□□□ -0.16
COL12A1Q99715 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms