Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 AP005117.1-202ENST00000581724 1908 ntBASIC17.51■□□□□ 0.39
LMO3Q8TAP4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 SPDYE11-202ENST00000450699 704 ntBASIC17.51■□□□□ 0.39
LMO3Q8TAP4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 SPDYE9P-201ENST00000570642 692 ntBASIC17.51■□□□□ 0.39
LMO3Q8TAP4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 SPDYE10P-202ENST00000612005 668 ntBASIC17.51■□□□□ 0.39
LMO3Q8TAP4 SPDYE8P-202ENST00000612377 668 ntBASIC17.51■□□□□ 0.39
LMO3Q8TAP4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 HCG11-201ENST00000411553 5696 ntBASIC17.51■□□□□ 0.39
LMO3Q8TAP4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 AC132872.4-202ENST00000622924 2756 ntBASIC17.51■□□□□ 0.39
LMO3Q8TAP4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO3Q8TAP4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 OR6D1P-202ENST00000641007 5290 ntBASIC17.5■□□□□ 0.39
LMO3Q8TAP4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 HAUS4P1-201ENST00000406739 1145 ntBASIC17.5■□□□□ 0.39
LMO3Q8TAP4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 AC069335.1-201ENST00000489972 472 ntBASIC17.5■□□□□ 0.39
LMO3Q8TAP4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 AC005829.1-201ENST00000570002 483 ntBASIC17.5■□□□□ 0.39
LMO3Q8TAP4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 AC105339.1-204ENST00000636249 355 ntBASIC17.5■□□□□ 0.39
LMO3Q8TAP4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.5■□□□□ 0.39
LMO3Q8TAP4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 PAUPAR-201ENST00000630360 2965 ntBASIC17.49■□□□□ 0.39
LMO3Q8TAP4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms