Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 AC009093.7-201ENST00000623853 1223 ntBASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC4Q8N9L1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AP3S2-216ENST00000617003 1561 ntBASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 FAM220BP-201ENST00000377689 816 ntBASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 KRT18P32-201ENST00000424695 1287 ntBASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AC023141.5-201ENST00000458585 616 ntBASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AC061975.2-201ENST00000581722 295 ntBASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 AC079781.4-201ENST00000641908 219 ntBASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC4Q8N9L1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms