Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AC063926.2-201ENST00000623766 1308 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AC015922.1-201ENST00000421102 1152 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AC005034.1-201ENST00000426657 489 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AC069120.2-201ENST00000524091 540 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AC091167.2-201ENST00000579581 588 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AL390754.1-201ENST00000619088 582 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AC008267.7-201ENST00000624570 1194 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AP001350.2-201ENST00000625104 1094 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 AL662844.4-201ENST00000606367 2838 ntBASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC155Q8N6L0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 SLC25A39P2-201ENST00000537614 270 ntBASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 MIR3909-201ENST00000579518 119 ntBASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 AL031055.1-201ENST00000606362 631 ntBASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 AL035252.4-201ENST00000624174 288 ntBASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC155Q8N6L0 AC008677.1-201ENST00000519230 1561 ntBASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC155Q8N6L0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms