Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 LINC02447-202ENST00000501888 2146 ntBASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 HCG4B-203ENST00000450128 991 ntBASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 IGHV3-22-201ENST00000520721 359 ntBASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 AL031432.2-201ENST00000566714 459 ntBASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 AL928711.1-201ENST00000570165 459 ntBASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 SLC25A6P4-201ENST00000586535 553 ntBASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 AC010507.1-201ENST00000633895 436 ntBASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC83Q8IWF9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 AL592424.1-201ENST00000563624 1536 ntBASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 PRAL-201ENST00000624952 3286 ntBASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 CRYGEP-201ENST00000412192 528 ntBASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 KRT126P-201ENST00000549467 1181 ntBASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 AP001005.1-201ENST00000571755 1248 ntBASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 AC021097.1-201ENST00000607902 574 ntBASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 AC112504.1-201ENST00000623415 1841 ntBASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC83Q8IWF9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms