Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC092171.3-201ENST00000610122 2651 ntBASIC13.58□□□□□ -0.24
CSMD2Q7Z408 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 AL021920.2-201ENST00000624828 1351 ntBASIC13.58□□□□□ -0.24
CSMD2Q7Z408 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 AC006277.1-201ENST00000624348 1610 ntBASIC13.58□□□□□ -0.24
CSMD2Q7Z408 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CSMD2Q7Z408 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC005077.2-201ENST00000449786 690 ntBASIC13.57□□□□□ -0.24
CSMD2Q7Z408 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC116353.5-201ENST00000638148 1699 ntBASIC13.57□□□□□ -0.24
CSMD2Q7Z408 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC234644.1-201ENST00000406065 370 ntBASIC13.57□□□□□ -0.24
CSMD2Q7Z408 FNTAP2-201ENST00000430308 634 ntBASIC13.57□□□□□ -0.24
CSMD2Q7Z408 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD2Q7Z408 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.57□□□□□ -0.24
CSMD2Q7Z408 REXO1L8P-201ENST00000604378 1897 ntBASIC13.57□□□□□ -0.24
CSMD2Q7Z408 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 BRI3BPP1-201ENST00000594224 787 ntBASIC13.56□□□□□ -0.24
CSMD2Q7Z408 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 AC018635.2-201ENST00000608625 364 ntBASIC13.56□□□□□ -0.24
CSMD2Q7Z408 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.56□□□□□ -0.24
CSMD2Q7Z408 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 RPL13P2-201ENST00000440687 659 ntBASIC13.56□□□□□ -0.24
CSMD2Q7Z408 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms