Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 IGLL3P-201ENST00000412472 434 ntBASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 OR7E47P-204ENST00000575924 449 ntBASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 AC079781.4-201ENST00000641908 219 ntBASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 AC116353.5-201ENST00000638148 1699 ntBASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 AC132872.4-202ENST00000622924 2756 ntBASIC15.24■□□□□ 0.03
CHMP1BQ7LBR1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 RHOQP3-201ENST00000437982 621 ntBASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 AC074386.1-202ENST00000463561 864 ntBASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 SLC25A6P2-201ENST00000497974 877 ntBASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 AC006538.3-201ENST00000612495 578 ntBASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHMP1BQ7LBR1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms