Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 NF2-208ENST00000403435 2568 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 ZBTB45P2-201ENST00000452245 1531 ntBASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 AC136604.1-201ENST00000418535 575 ntBASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 CTBP2P5-201ENST00000454986 1264 ntBASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 AL049840.4-201ENST00000602422 811 ntBASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 AL606495.2-201ENST00000605867 535 ntBASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC141Q6ZP82 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 AC009053.2-201ENST00000563701 2365 ntBASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 AC099336.1-201ENST00000417053 1171 ntBASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 USB1-202ENST00000423271 1217 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 ACTG1P3-201ENST00000431775 1114 ntBASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 TECR-220ENST00000600083 1204 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC141Q6ZP82 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 PACS1-203ENST00000524815 628 ntTSL 4 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 AC120045.2-201ENST00000567334 178 ntBASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 AC133539.2-201ENST00000604757 467 ntBASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC141Q6ZP82 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 AC005229.1-201ENST00000392885 409 ntBASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CCDC141Q6ZP82 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms