Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AC006033.1-201ENST00000440505 426 ntBASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 APRT-204ENST00000563655 709 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AC025279.2-201ENST00000569730 653 ntBASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 INTS4P2-202ENST00000614726 2019 ntBASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 AC005052.1-201ENST00000625181 2492 ntBASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 RN7SL560P-201ENST00000577943 264 ntBASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 MIR3615-201ENST00000581999 87 ntBASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 AC133539.2-201ENST00000604757 467 ntBASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 REXO1L1P-202ENST00000608646 1974 ntBASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13DQ5THJ4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms