Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL161645.1-201ENST00000622716 1255 ntBASIC15.86■□□□□ 0.13
PCDH1Q08174 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH1Q08174 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PCDH1Q08174 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH1Q08174 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDH1Q08174 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 SLC25A1P1-201ENST00000528351 927 ntBASIC15.85■□□□□ 0.13
PCDH1Q08174 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDH1Q08174 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.85■□□□□ 0.13
PCDH1Q08174 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.85■□□□□ 0.13
PCDH1Q08174 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 AC018845.2-201ENST00000568326 409 ntBASIC15.85■□□□□ 0.13
PCDH1Q08174 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDH1Q08174 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDH1Q08174 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDH1Q08174 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDH1Q08174 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH1Q08174 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDH1Q08174 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH1Q08174 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH1Q08174 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 MIR648-201ENST00000385046 94 ntBASIC15.84■□□□□ 0.13
PCDH1Q08174 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 AC007967.2-201ENST00000432613 625 ntBASIC15.84■□□□□ 0.13
PCDH1Q08174 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 RNA5SP416-201ENST00000516838 111 ntBASIC15.84■□□□□ 0.13
PCDH1Q08174 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDH1Q08174 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDH1Q08174 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDH1Q08174 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 AC068137.2-201ENST00000605408 478 ntBASIC15.84■□□□□ 0.13
PCDH1Q08174 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCDH1Q08174 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 WASH6P-202ENST00000359512 1437 ntBASIC15.84■□□□□ 0.13
PCDH1Q08174 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH1Q08174 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDH1Q08174 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH1Q08174 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDH1Q08174 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDH1Q08174 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms