Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCN7AQ01118 PTP4A1P2-201ENST00000546033 454 ntBASIC20.07■□□□□ 0.8
SCN7AQ01118 AL583810.1-201ENST00000553344 1045 ntBASIC20.07■□□□□ 0.8
SCN7AQ01118 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SCN7AQ01118 BTNL10-201ENST00000595971 695 ntBASIC20.07■□□□□ 0.8
SCN7AQ01118 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.07■□□□□ 0.8
SCN7AQ01118 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN7AQ01118 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN7AQ01118 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 MSTO2P-201ENST00000314835 1709 ntBASIC20.06■□□□□ 0.8
SCN7AQ01118 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SCN7AQ01118 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN7AQ01118 KRT8P44-201ENST00000441609 1350 ntBASIC20.06■□□□□ 0.8
SCN7AQ01118 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN7AQ01118 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN7AQ01118 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN7AQ01118 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.06■□□□□ 0.8
SCN7AQ01118 ACTG1P3-201ENST00000431775 1114 ntBASIC20.06■□□□□ 0.8
SCN7AQ01118 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 AC108725.1-201ENST00000495472 409 ntBASIC20.06■□□□□ 0.8
SCN7AQ01118 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SCN7AQ01118 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.06■□□□□ 0.8
SCN7AQ01118 AC107373.2-201ENST00000607735 490 ntBASIC20.06■□□□□ 0.8
SCN7AQ01118 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.06■□□□□ 0.8
SCN7AQ01118 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SCN7AQ01118 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN7AQ01118 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SCN7AQ01118 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SCN7AQ01118 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SCN7AQ01118 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.05■□□□□ 0.8
SCN7AQ01118 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.05■□□□□ 0.8
SCN7AQ01118 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.05■□□□□ 0.8
SCN7AQ01118 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.05■□□□□ 0.8
SCN7AQ01118 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.05■□□□□ 0.8
SCN7AQ01118 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.05■□□□□ 0.8
SCN7AQ01118 FO681548.1-201ENST00000455617 1132 ntBASIC20.05■□□□□ 0.8
SCN7AQ01118 VDAC1P7-201ENST00000462417 847 ntBASIC20.05■□□□□ 0.8
SCN7AQ01118 KRT18P43-201ENST00000469825 1281 ntBASIC20.05■□□□□ 0.8
SCN7AQ01118 SLC25A47P1-201ENST00000531577 414 ntBASIC20.05■□□□□ 0.8
SCN7AQ01118 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.05■□□□□ 0.8
SCN7AQ01118 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SCN7AQ01118 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SCN7AQ01118 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.05■□□□□ 0.8
SCN7AQ01118 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN7AQ01118 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.05■□□□□ 0.8
SCN7AQ01118 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
SCN7AQ01118 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.04■□□□□ 0.8
SCN7AQ01118 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
SCN7AQ01118 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
SCN7AQ01118 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 FAM21FP-201ENST00000426241 1131 ntBASIC20.04■□□□□ 0.8
SCN7AQ01118 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.04■□□□□ 0.8
SCN7AQ01118 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN7AQ01118 FAM8A2P-201ENST00000528813 1142 ntBASIC20.04■□□□□ 0.8
SCN7AQ01118 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.04■□□□□ 0.8
SCN7AQ01118 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.04■□□□□ 0.8
SCN7AQ01118 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN7AQ01118 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
SCN7AQ01118 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN7AQ01118 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.04■□□□□ 0.8
SCN7AQ01118 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SCN7AQ01118 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN7AQ01118 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCN7AQ01118 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN7AQ01118 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms