Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.01■□□□□ 0.15
YBX1P67809 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.01■□□□□ 0.15
YBX1P67809 AC005829.1-201ENST00000570002 483 ntBASIC16.01■□□□□ 0.15
YBX1P67809 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
YBX1P67809 MIR4469-201ENST00000583919 79 ntBASIC16.01■□□□□ 0.15
YBX1P67809 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.01■□□□□ 0.15
YBX1P67809 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.01■□□□□ 0.15
YBX1P67809 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.01■□□□□ 0.15
YBX1P67809 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.01■□□□□ 0.15
YBX1P67809 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
YBX1P67809 AL603832.2-201ENST00000566195 2125 ntBASIC16.01■□□□□ 0.15
YBX1P67809 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.01■□□□□ 0.15
YBX1P67809 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
YBX1P67809 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.01■□□□□ 0.15
YBX1P67809 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16■□□□□ 0.15
YBX1P67809 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16■□□□□ 0.15
YBX1P67809 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16■□□□□ 0.15
YBX1P67809 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
YBX1P67809 AC092384.3-202ENST00000564646 2873 ntBASIC16■□□□□ 0.15
YBX1P67809 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16■□□□□ 0.15
YBX1P67809 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
YBX1P67809 PMS2P4-201ENST00000412466 1052 ntBASIC16■□□□□ 0.15
YBX1P67809 ADH5P3-201ENST00000433842 1137 ntBASIC16■□□□□ 0.15
YBX1P67809 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16■□□□□ 0.15
YBX1P67809 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16■□□□□ 0.15
YBX1P67809 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16■□□□□ 0.15
YBX1P67809 AC112191.1-201ENST00000523689 701 ntBASIC16■□□□□ 0.15
YBX1P67809 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16■□□□□ 0.15
YBX1P67809 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16■□□□□ 0.15
YBX1P67809 AC109635.5-201ENST00000533593 962 ntBASIC16■□□□□ 0.15
YBX1P67809 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16■□□□□ 0.15
YBX1P67809 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
YBX1P67809 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16■□□□□ 0.15
YBX1P67809 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
YBX1P67809 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16■□□□□ 0.15
YBX1P67809 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16■□□□□ 0.15
YBX1P67809 GPAA1P2-202ENST00000606848 1787 ntBASIC16■□□□□ 0.15
YBX1P67809 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
YBX1P67809 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16■□□□□ 0.15
YBX1P67809 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16■□□□□ 0.15
YBX1P67809 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16■□□□□ 0.15
YBX1P67809 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
YBX1P67809 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.99■□□□□ 0.15
YBX1P67809 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
YBX1P67809 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 DNAJB3-201ENST00000446806 729 ntBASIC15.99■□□□□ 0.15
YBX1P67809 HLA-J-202ENST00000469281 1241 ntBASIC15.99■□□□□ 0.15
YBX1P67809 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.99■□□□□ 0.15
YBX1P67809 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
YBX1P67809 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.99■□□□□ 0.15
YBX1P67809 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
YBX1P67809 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.99■□□□□ 0.15
YBX1P67809 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.99■□□□□ 0.15
YBX1P67809 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 GGT3P-204ENST00000453783 1664 ntBASIC15.99■□□□□ 0.15
YBX1P67809 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
YBX1P67809 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
YBX1P67809 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YBX1P67809 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.98■□□□□ 0.15
YBX1P67809 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
YBX1P67809 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms