Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 PKD1P1-201ENST00000458669 6805 ntBASIC17.92■□□□□ 0.46
NCKAP1LP55160 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 KRT18P28-201ENST00000453838 1332 ntBASIC17.91■□□□□ 0.46
NCKAP1LP55160 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.91■□□□□ 0.46
NCKAP1LP55160 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKAP1LP55160 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 METTL21AP1-201ENST00000438852 635 ntBASIC17.9■□□□□ 0.46
NCKAP1LP55160 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AC245100.5-201ENST00000452108 331 ntBASIC17.9■□□□□ 0.46
NCKAP1LP55160 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AC018529.1-201ENST00000613063 361 ntBASIC17.9■□□□□ 0.46
NCKAP1LP55160 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.9■□□□□ 0.46
NCKAP1LP55160 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 AL596087.1-201ENST00000400979 1969 ntBASIC17.9■□□□□ 0.46
NCKAP1LP55160 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKAP1LP55160 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NCKAP1LP55160 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.89■□□□□ 0.46
NCKAP1LP55160 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.89■□□□□ 0.46
NCKAP1LP55160 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
NCKAP1LP55160 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
NCKAP1LP55160 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms