Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A12P48065 AL671277.1-201ENST00000429656 993 ntBASIC15.81■□□□□ 0.12
SLC6A12P48065 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 FOXO1B-201ENST00000504678 1527 ntBASIC15.81■□□□□ 0.12
SLC6A12P48065 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A12P48065 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A12P48065 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC6A12P48065 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SLC6A12P48065 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC6A12P48065 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 AP000347.1-202ENST00000435868 847 ntBASIC15.8■□□□□ 0.12
SLC6A12P48065 AC105233.2-201ENST00000523697 349 ntBASIC15.8■□□□□ 0.12
SLC6A12P48065 FAM86C2P-203ENST00000528684 1004 ntBASIC15.8■□□□□ 0.12
SLC6A12P48065 AF228730.5-201ENST00000530288 346 ntBASIC15.8■□□□□ 0.12
SLC6A12P48065 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC6A12P48065 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 MIR4321-201ENST00000592276 80 ntBASIC15.8■□□□□ 0.12
SLC6A12P48065 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.8■□□□□ 0.12
SLC6A12P48065 C20orf181-201ENST00000623918 480 ntBASIC15.8■□□□□ 0.12
SLC6A12P48065 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A12P48065 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A12P48065 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A12P48065 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A12P48065 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
SLC6A12P48065 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 AC008894.3-201ENST00000624324 3103 ntBASIC15.79■□□□□ 0.12
SLC6A12P48065 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC6A12P48065 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC6A12P48065 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A12P48065 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A12P48065 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A12P48065 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SLC6A12P48065 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 YBX2P1-201ENST00000394192 760 ntBASIC15.79■□□□□ 0.12
SLC6A12P48065 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A12P48065 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SLC6A12P48065 RN7SL589P-201ENST00000481268 310 ntBASIC15.79■□□□□ 0.12
SLC6A12P48065 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A12P48065 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.79■□□□□ 0.12
SLC6A12P48065 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC6A12P48065 AC008267.7-201ENST00000624570 1194 ntBASIC15.79■□□□□ 0.12
SLC6A12P48065 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms