Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.02■□□□□ 0.32
SCNN1AP37088 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.02■□□□□ 0.32
SCNN1AP37088 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCNN1AP37088 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 KRT18P32-201ENST00000424695 1287 ntBASIC17.02■□□□□ 0.32
SCNN1AP37088 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.02■□□□□ 0.32
SCNN1AP37088 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.02■□□□□ 0.32
SCNN1AP37088 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
SCNN1AP37088 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.02■□□□□ 0.32
SCNN1AP37088 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCNN1AP37088 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SCNN1AP37088 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SCNN1AP37088 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCNN1AP37088 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCNN1AP37088 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
SCNN1AP37088 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.02■□□□□ 0.31
SCNN1AP37088 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCNN1AP37088 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SCNN1AP37088 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SCNN1AP37088 AP3S2-216ENST00000617003 1561 ntBASIC17.02■□□□□ 0.31
SCNN1AP37088 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SCNN1AP37088 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCNN1AP37088 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
SCNN1AP37088 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SCNN1AP37088 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 AP001282.1-201ENST00000531301 1499 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 OR6D1P-203ENST00000641209 4860 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SCNN1AP37088 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCNN1AP37088 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCNN1AP37088 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.01■□□□□ 0.31
SCNN1AP37088 MIR1233-2-201ENST00000408138 82 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 MIR1233-1-201ENST00000408722 82 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 FAM58DP-201ENST00000428076 619 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 GPS2P2-201ENST00000430745 888 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 AC023141.5-201ENST00000458585 616 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.01■□□□□ 0.31
SCNN1AP37088 RNA5SP410-201ENST00000516285 106 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 RARRES2P9-201ENST00000565168 469 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SCNN1AP37088 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.01■□□□□ 0.31
SCNN1AP37088 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SCNN1AP37088 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 AC069224.1-201ENST00000566372 1715 ntBASIC17.01■□□□□ 0.31
SCNN1AP37088 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SCNN1AP37088 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCNN1AP37088 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17■□□□□ 0.31
SCNN1AP37088 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 AL603832.2-201ENST00000566195 2125 ntBASIC17■□□□□ 0.31
SCNN1AP37088 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17■□□□□ 0.31
SCNN1AP37088 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SCNN1AP37088 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17■□□□□ 0.31
SCNN1AP37088 CNN2P11-201ENST00000429351 262 ntBASIC17■□□□□ 0.31
SCNN1AP37088 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17■□□□□ 0.31
SCNN1AP37088 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17■□□□□ 0.31
SCNN1AP37088 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17■□□□□ 0.31
SCNN1AP37088 ALG1L8P-201ENST00000533887 760 ntBASIC17■□□□□ 0.31
SCNN1AP37088 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17■□□□□ 0.31
SCNN1AP37088 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCNN1AP37088 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17■□□□□ 0.31
SCNN1AP37088 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms