Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A4P31645 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC6A4P31645 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A4P31645 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A4P31645 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A4P31645 REXO1L8P-201ENST00000604378 1897 ntBASIC16.78■□□□□ 0.28
SLC6A4P31645 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A4P31645 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC6A4P31645 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A4P31645 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC6A4P31645 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC6A4P31645 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.78■□□□□ 0.28
SLC6A4P31645 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A4P31645 AC093214.1-201ENST00000511688 1107 ntBASIC16.78■□□□□ 0.28
SLC6A4P31645 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC6A4P31645 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC6A4P31645 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC6A4P31645 AC024267.1-201ENST00000582320 895 ntBASIC16.78■□□□□ 0.28
SLC6A4P31645 AL158211.3-201ENST00000607385 239 ntBASIC16.78■□□□□ 0.28
SLC6A4P31645 SPDYE12P-201ENST00000618416 771 ntBASIC16.78■□□□□ 0.28
SLC6A4P31645 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC6A4P31645 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC6A4P31645 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A4P31645 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC6A4P31645 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A4P31645 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A4P31645 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A4P31645 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC6A4P31645 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 AL592424.1-201ENST00000563624 1536 ntBASIC16.77■□□□□ 0.28
SLC6A4P31645 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A4P31645 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A4P31645 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A4P31645 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC6A4P31645 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A4P31645 IGHV3-42-201ENST00000520410 361 ntBASIC16.77■□□□□ 0.28
SLC6A4P31645 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC6A4P31645 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC6A4P31645 SPCS2P1-201ENST00000561636 679 ntBASIC16.77■□□□□ 0.28
SLC6A4P31645 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC6A4P31645 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC6A4P31645 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC6A4P31645 RN7SL828P-201ENST00000607615 303 ntBASIC16.77■□□□□ 0.28
SLC6A4P31645 AL133215.2-201ENST00000609242 977 ntBASIC16.77■□□□□ 0.28
SLC6A4P31645 AL390754.1-201ENST00000619088 582 ntBASIC16.77■□□□□ 0.28
SLC6A4P31645 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A4P31645 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A4P31645 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A4P31645 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SLC6A4P31645 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SLC6A4P31645 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SLC6A4P31645 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A4P31645 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A4P31645 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC6A4P31645 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC6A4P31645 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC6A4P31645 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A4P31645 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC6A4P31645 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms