Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HOXA9P31269 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
HOXA9P31269 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HOXA9P31269 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HOXA9P31269 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HOXA9P31269 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXA9P31269 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXA9P31269 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXA9P31269 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXA9P31269 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXA9P31269 AC132938.2-201ENST00000579188 680 ntBASIC16.96■□□□□ 0.31
HOXA9P31269 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXA9P31269 AC025048.3-201ENST00000590609 569 ntBASIC16.96■□□□□ 0.31
HOXA9P31269 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 AC005702.4-201ENST00000618393 416 ntBASIC16.96■□□□□ 0.31
HOXA9P31269 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 AL591163.1-201ENST00000641757 987 ntBASIC16.96■□□□□ 0.31
HOXA9P31269 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXA9P31269 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HOXA9P31269 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HOXA9P31269 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
HOXA9P31269 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA9P31269 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA9P31269 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HOXA9P31269 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
HOXA9P31269 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA9P31269 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA9P31269 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 AL603756.1-201ENST00000606511 2163 ntBASIC16.95■□□□□ 0.3
HOXA9P31269 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HOXA9P31269 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.95■□□□□ 0.3
HOXA9P31269 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA9P31269 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HOXA9P31269 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA9P31269 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA9P31269 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 AC079776.1-201ENST00000401540 1152 ntBASIC16.95■□□□□ 0.3
HOXA9P31269 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA9P31269 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA9P31269 MYCLP2-201ENST00000449268 967 ntBASIC16.95■□□□□ 0.3
HOXA9P31269 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA9P31269 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA9P31269 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA9P31269 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA9P31269 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA9P31269 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA9P31269 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.95■□□□□ 0.3
HOXA9P31269 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA9P31269 AC017083.2-201ENST00000608069 979 ntBASIC16.95■□□□□ 0.3
HOXA9P31269 AC060834.1-201ENST00000443027 2032 ntBASIC16.95■□□□□ 0.3
HOXA9P31269 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HOXA9P31269 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA9P31269 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA9P31269 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HOXA9P31269 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 CYP4F24P-201ENST00000586049 1580 ntBASIC16.94■□□□□ 0.3
HOXA9P31269 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 AC106820.2-201ENST00000563775 3264 ntBASIC16.94■□□□□ 0.3
HOXA9P31269 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 AC005622.1-201ENST00000636801 1703 ntBASIC16.94■□□□□ 0.3
HOXA9P31269 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HOXA9P31269 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.94■□□□□ 0.3
HOXA9P31269 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 HIST3H2BA-201ENST00000436555 524 ntBASIC16.94■□□□□ 0.3
HOXA9P31269 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.94■□□□□ 0.3
HOXA9P31269 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.94■□□□□ 0.3
HOXA9P31269 ELK1P1-201ENST00000485699 580 ntBASIC16.94■□□□□ 0.3
HOXA9P31269 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.94■□□□□ 0.3
HOXA9P31269 HILS1-202ENST00000545329 423 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms