Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.35■□□□□ 0.37
PTPN1P18031 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN1P18031 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN1P18031 AC051619.7-201ENST00000568314 623 ntBASIC17.35■□□□□ 0.37
PTPN1P18031 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
PTPN1P18031 AC003101.2-201ENST00000612557 442 ntBASIC17.35■□□□□ 0.37
PTPN1P18031 AC093512.1-201ENST00000617969 520 ntBASIC17.35■□□□□ 0.37
PTPN1P18031 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN1P18031 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN1P18031 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTPN1P18031 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN1P18031 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN1P18031 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN1P18031 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTPN1P18031 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN1P18031 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN1P18031 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN1P18031 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN1P18031 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN1P18031 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTPN1P18031 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN1P18031 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTPN1P18031 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTPN1P18031 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN1P18031 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.34■□□□□ 0.37
PTPN1P18031 PCDHA14-201ENST00000506751 2298 ntBASIC17.34■□□□□ 0.37
PTPN1P18031 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN1P18031 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN1P18031 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN1P18031 AC024267.1-201ENST00000582320 895 ntBASIC17.34■□□□□ 0.37
PTPN1P18031 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN1P18031 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN1P18031 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN1P18031 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPN1P18031 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN1P18031 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN1P18031 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.33■□□□□ 0.37
PTPN1P18031 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PTPN1P18031 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN1P18031 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN1P18031 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PTPN1P18031 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
PTPN1P18031 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
PTPN1P18031 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PTPN1P18031 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PTPN1P18031 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PTPN1P18031 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN1P18031 KLF2P3-201ENST00000451977 1087 ntBASIC17.33■□□□□ 0.36
PTPN1P18031 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PTPN1P18031 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN1P18031 DUX4L27-201ENST00000554796 1261 ntBASIC17.33■□□□□ 0.36
PTPN1P18031 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPN1P18031 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN1P18031 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN1P18031 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN1P18031 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN1P18031 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN1P18031 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN1P18031 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN1P18031 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN1P18031 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTPN1P18031 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPN1P18031 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN1P18031 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN1P18031 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN1P18031 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN1P18031 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN1P18031 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PTPN1P18031 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN1P18031 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTPN1P18031 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN1P18031 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN1P18031 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms