Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.96■□□□□ 0.63
CAPN2P17655 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN2P17655 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.96■□□□□ 0.63
CAPN2P17655 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.96■□□□□ 0.63
CAPN2P17655 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN2P17655 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.96■□□□□ 0.63
CAPN2P17655 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.96■□□□□ 0.63
CAPN2P17655 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.96■□□□□ 0.63
CAPN2P17655 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CAPN2P17655 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN2P17655 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN2P17655 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN2P17655 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN2P17655 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN2P17655 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CAPN2P17655 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN2P17655 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN2P17655 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 AL135999.2-201ENST00000622438 1686 ntBASIC18.95■□□□□ 0.62
CAPN2P17655 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CAPN2P17655 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CAPN2P17655 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.95■□□□□ 0.62
CAPN2P17655 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 AC009477.1-201ENST00000452936 217 ntBASIC18.95■□□□□ 0.62
CAPN2P17655 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.95■□□□□ 0.62
CAPN2P17655 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.95■□□□□ 0.62
CAPN2P17655 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.95■□□□□ 0.62
CAPN2P17655 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.95■□□□□ 0.62
CAPN2P17655 AL606495.2-201ENST00000605867 535 ntBASIC18.95■□□□□ 0.62
CAPN2P17655 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.95■□□□□ 0.62
CAPN2P17655 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CAPN2P17655 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CAPN2P17655 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN2P17655 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CAPN2P17655 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CAPN2P17655 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN2P17655 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 AC005052.1-201ENST00000625181 2492 ntBASIC18.94■□□□□ 0.62
CAPN2P17655 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 AC100803.2-201ENST00000562459 1963 ntBASIC18.94■□□□□ 0.62
CAPN2P17655 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.94■□□□□ 0.62
CAPN2P17655 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.94■□□□□ 0.62
CAPN2P17655 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.94■□□□□ 0.62
CAPN2P17655 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.94■□□□□ 0.62
CAPN2P17655 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN2P17655 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN2P17655 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CAPN2P17655 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN2P17655 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN2P17655 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CAPN2P17655 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms