Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FREM3P0C091 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FREM3P0C091 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
FREM3P0C091 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 AC097493.3-201ENST00000509725 367 ntBASIC14.89□□□□□ -0.03
FREM3P0C091 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.89□□□□□ -0.03
FREM3P0C091 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
FREM3P0C091 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.88□□□□□ -0.03
FREM3P0C091 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
FREM3P0C091 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.88□□□□□ -0.03
FREM3P0C091 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.88□□□□□ -0.03
FREM3P0C091 AC142381.1-201ENST00000426099 345 ntBASIC14.88□□□□□ -0.03
FREM3P0C091 AC055876.3-201ENST00000431496 288 ntBASIC14.88□□□□□ -0.03
FREM3P0C091 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 SLC25A39P2-201ENST00000537614 270 ntBASIC14.88□□□□□ -0.03
FREM3P0C091 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.88□□□□□ -0.03
FREM3P0C091 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.88□□□□□ -0.03
FREM3P0C091 AC138649.4-201ENST00000612222 287 ntBASIC14.88□□□□□ -0.03
FREM3P0C091 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.88□□□□□ -0.03
FREM3P0C091 OR6D1P-202ENST00000641007 5290 ntBASIC14.88□□□□□ -0.03
FREM3P0C091 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.88□□□□□ -0.03
FREM3P0C091 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FREM3P0C091 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.88□□□□□ -0.03
FREM3P0C091 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.87□□□□□ -0.03
FREM3P0C091 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 MIR770-201ENST00000390219 98 ntBASIC14.87□□□□□ -0.03
FREM3P0C091 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.87□□□□□ -0.03
FREM3P0C091 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.87□□□□□ -0.03
FREM3P0C091 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.87□□□□□ -0.03
FREM3P0C091 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.87□□□□□ -0.03
FREM3P0C091 AL138828.2-201ENST00000615812 383 ntBASIC14.87□□□□□ -0.03
FREM3P0C091 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.87□□□□□ -0.03
FREM3P0C091 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.87□□□□□ -0.03
FREM3P0C091 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 FAM86GP-201ENST00000448322 971 ntBASIC14.87□□□□□ -0.03
FREM3P0C091 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.87□□□□□ -0.03
FREM3P0C091 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 RNA5SP410-201ENST00000516285 106 ntBASIC14.87□□□□□ -0.03
FREM3P0C091 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 PCDHA1-201ENST00000378133 2726 ntBASIC14.87□□□□□ -0.03
FREM3P0C091 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms