Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.46□□□□□ -0.25
SSSCA1O60232 POU5F1P6-201ENST00000466990 990 ntBASIC13.46□□□□□ -0.25
SSSCA1O60232 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.46□□□□□ -0.25
SSSCA1O60232 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.46□□□□□ -0.25
SSSCA1O60232 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SSSCA1O60232 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.46□□□□□ -0.25
SSSCA1O60232 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.46□□□□□ -0.25
SSSCA1O60232 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SSSCA1O60232 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.46□□□□□ -0.26
SSSCA1O60232 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.46□□□□□ -0.26
SSSCA1O60232 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.46□□□□□ -0.26
SSSCA1O60232 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SSSCA1O60232 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.46□□□□□ -0.26
SSSCA1O60232 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SSSCA1O60232 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SSSCA1O60232 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.46□□□□□ -0.26
SSSCA1O60232 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.46□□□□□ -0.26
SSSCA1O60232 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SSSCA1O60232 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SSSCA1O60232 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.46□□□□□ -0.26
SSSCA1O60232 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SSSCA1O60232 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.46□□□□□ -0.26
SSSCA1O60232 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SSSCA1O60232 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SSSCA1O60232 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SSSCA1O60232 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SSSCA1O60232 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 AC004817.3-201ENST00000602957 2129 ntBASIC13.45□□□□□ -0.26
SSSCA1O60232 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SSSCA1O60232 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SSSCA1O60232 AC023157.3-201ENST00000619086 2088 ntBASIC13.45□□□□□ -0.26
SSSCA1O60232 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.45□□□□□ -0.26
SSSCA1O60232 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 AL645929.1-201ENST00000420084 975 ntBASIC13.45□□□□□ -0.26
SSSCA1O60232 LINC00982-205ENST00000420957 435 ntBASIC13.45□□□□□ -0.26
SSSCA1O60232 TSPY5P-201ENST00000426936 936 ntBASIC13.45□□□□□ -0.26
SSSCA1O60232 SPDYE13P-201ENST00000445314 798 ntBASIC13.45□□□□□ -0.26
SSSCA1O60232 AC092647.4-201ENST00000457211 535 ntBASIC13.45□□□□□ -0.26
SSSCA1O60232 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.45□□□□□ -0.26
SSSCA1O60232 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.45□□□□□ -0.26
SSSCA1O60232 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.45□□□□□ -0.26
SSSCA1O60232 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SSSCA1O60232 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SSSCA1O60232 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.45□□□□□ -0.26
SSSCA1O60232 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.45□□□□□ -0.26
SSSCA1O60232 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSSCA1O60232 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SSSCA1O60232 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 RNF152P1-201ENST00000397754 604 ntBASIC13.44□□□□□ -0.26
SSSCA1O60232 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 AC246785.2-201ENST00000432512 513 ntBASIC13.44□□□□□ -0.26
SSSCA1O60232 AL137013.1-201ENST00000432946 1228 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms