Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 AC026691.1-201ENST00000602502 2017 ntBASIC14.63□□□□□ -0.07
TRAF3IP2O43734 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 AL391005.1-201ENST00000623953 2435 ntBASIC14.63□□□□□ -0.07
TRAF3IP2O43734 AL592424.1-201ENST00000563624 1536 ntBASIC14.63□□□□□ -0.07
TRAF3IP2O43734 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 C20orf181-201ENST00000623918 480 ntBASIC14.63□□□□□ -0.07
TRAF3IP2O43734 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 AKAP8P1-201ENST00000434743 1349 ntBASIC14.63□□□□□ -0.07
TRAF3IP2O43734 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAF3IP2O43734 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 AL596087.1-201ENST00000400979 1969 ntBASIC14.62□□□□□ -0.07
TRAF3IP2O43734 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 ALG1L5P-201ENST00000482043 771 ntBASIC14.62□□□□□ -0.07
TRAF3IP2O43734 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 MTDHP5-201ENST00000598980 586 ntBASIC14.62□□□□□ -0.07
TRAF3IP2O43734 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 U82695.1-201ENST00000635752 1889 ntBASIC14.62□□□□□ -0.07
TRAF3IP2O43734 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.62□□□□□ -0.07
TRAF3IP2O43734 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF3IP2O43734 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 AL513523.2-202ENST00000427283 2040 ntBASIC14.61□□□□□ -0.07
TRAF3IP2O43734 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF3IP2O43734 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms