Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 ELL2P1-201ENST00000413990 1906 ntBASIC14.09□□□□□ -0.15
GCM1Q9NP62 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 AC006538.1-201ENST00000567905 1585 ntBASIC14.09□□□□□ -0.15
GCM1Q9NP62 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GCM1Q9NP62 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GCM1Q9NP62 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GCM1Q9NP62 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
GCM1Q9NP62 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GCM1Q9NP62 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GCM1Q9NP62 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GCM1Q9NP62 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.08□□□□□ -0.15
GCM1Q9NP62 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 HLA-J-202ENST00000469281 1241 ntBASIC14.08□□□□□ -0.16
GCM1Q9NP62 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 AC099522.2-201ENST00000607001 744 ntBASIC14.08□□□□□ -0.16
GCM1Q9NP62 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 TSPY26P-202ENST00000565928 3884 ntBASIC14.08□□□□□ -0.16
GCM1Q9NP62 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GCM1Q9NP62 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.08□□□□□ -0.16
GCM1Q9NP62 AC011676.5-201ENST00000624864 2660 ntBASIC14.08□□□□□ -0.16
GCM1Q9NP62 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 AL512652.2-201ENST00000625156 1716 ntBASIC14.07□□□□□ -0.16
GCM1Q9NP62 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 NKILA-202ENST00000614771 2598 ntBASIC14.07□□□□□ -0.16
GCM1Q9NP62 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GCM1Q9NP62 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.07□□□□□ -0.16
GCM1Q9NP62 CEND1P1-201ENST00000451006 455 ntBASIC14.07□□□□□ -0.16
GCM1Q9NP62 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms