Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 RPPH1-201ENST00000516869 333 ntBASIC13.37□□□□□ -0.27
NKX6-2Q9C056 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 AL512604.3-201ENST00000569583 964 ntBASIC13.37□□□□□ -0.27
NKX6-2Q9C056 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 AC006058.3-201ENST00000606217 1069 ntBASIC13.37□□□□□ -0.27
NKX6-2Q9C056 AC009154.2-201ENST00000621177 724 ntBASIC13.37□□□□□ -0.27
NKX6-2Q9C056 AC010653.2-201ENST00000623505 997 ntBASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 CICP8-201ENST00000455800 2813 ntBASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 COL6A4P2-202ENST00000504443 2753 ntBASIC13.36□□□□□ -0.27
NKX6-2Q9C056 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 AL355802.2-201ENST00000402069 882 ntBASIC13.36□□□□□ -0.27
NKX6-2Q9C056 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.36□□□□□ -0.27
NKX6-2Q9C056 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-2Q9C056 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms