Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL25A1Q9BXS0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL25A1Q9BXS0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
COL25A1Q9BXS0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AC005730.2-201ENST00000564549 1184 ntBASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 AL805961.1-203ENST00000641078 1258 ntBASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL25A1Q9BXS0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AL354989.2-201ENST00000435838 1540 ntBASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AC074138.1-201ENST00000611182 1303 ntBASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 JPT2-203ENST00000382711 894 ntTSL 4 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 PDIA3P2-201ENST00000428073 158 ntBASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AC242376.2-201ENST00000619355 883 ntBASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL25A1Q9BXS0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 AC093724.1-201ENST00000448659 1027 ntBASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 AC242376.1-201ENST00000559033 726 ntBASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 RN7SL713P-201ENST00000582127 302 ntBASIC16.24■□□□□ 0.19
COL25A1Q9BXS0 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms