Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 PTCHD3P3-201ENST00000403073 906 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ELK2BP-201ENST00000415014 1224 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 LAGE3P1-201ENST00000425356 484 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 RPS2P1-201ENST00000434010 821 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 AP002490.2-201ENST00000524791 560 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 TP73-AS1-207ENST00000624167 988 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 AC107918.4-202ENST00000641623 219 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 AL391256.1-201ENST00000443260 1855 ntBASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRDL1Q9BU40 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 KRT8P49-201ENST00000604166 1432 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 PI4KAP1-204ENST00000612579 1703 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 MYO15B-237ENST00000642007 4893 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 PAWRP1-201ENST00000451083 565 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 RNPS1P1-201ENST00000507437 918 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 AC073648.2-201ENST00000510116 352 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 OR7E14P-202ENST00000530490 1290 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 AC006557.2-201ENST00000592985 1240 ntBASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CHRDL1Q9BU40 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms