Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 KRT18P27-201ENST00000427733 1299 ntBASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC136632.2-201ENST00000512891 861 ntBASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AL445228.2-201ENST00000605589 952 ntBASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC068587.6-202ENST00000641839 5619 ntBASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AL592424.1-201ENST00000563624 1536 ntBASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 UPK3BP1-201ENST00000428678 509 ntBASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 PRELID1P1-202ENST00000567272 903 ntBASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC008667.4-201ENST00000607370 168 ntBASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC005622.1-201ENST00000636801 1703 ntBASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHANK2-AS3Q9BTD1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC012569.1-201ENST00000591191 1524 ntBASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 NORAD-201ENST00000565493 5339 ntBASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHANK2-AS3Q9BTD1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms