Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.54□□□□□ -0.4
VGLL1Q99990 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.53□□□□□ -0.4
VGLL1Q99990 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.53□□□□□ -0.4
VGLL1Q99990 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.53□□□□□ -0.4
VGLL1Q99990 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 PAWRP1-201ENST00000451083 565 ntBASIC12.53□□□□□ -0.4
VGLL1Q99990 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.53□□□□□ -0.4
VGLL1Q99990 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.53□□□□□ -0.4
VGLL1Q99990 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 AC002310.6-201ENST00000624451 1377 ntBASIC12.53□□□□□ -0.4
VGLL1Q99990 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VGLL1Q99990 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.53□□□□□ -0.4
VGLL1Q99990 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.53□□□□□ -0.4
VGLL1Q99990 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.52□□□□□ -0.4
VGLL1Q99990 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.52□□□□□ -0.4
VGLL1Q99990 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
VGLL1Q99990 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
VGLL1Q99990 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
VGLL1Q99990 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VGLL1Q99990 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
VGLL1Q99990 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
VGLL1Q99990 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.52□□□□□ -0.4
VGLL1Q99990 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.52□□□□□ -0.41
VGLL1Q99990 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms