Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.61□□□□□ -0.07
VRK1Q99986 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.61□□□□□ -0.07
VRK1Q99986 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.61□□□□□ -0.07
VRK1Q99986 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
VRK1Q99986 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.61□□□□□ -0.07
VRK1Q99986 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VRK1Q99986 AL513190.1-201ENST00000621254 727 ntBASIC14.61□□□□□ -0.07
VRK1Q99986 AC004877.2-201ENST00000623941 599 ntBASIC14.61□□□□□ -0.07
VRK1Q99986 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VRK1Q99986 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK1Q99986 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VRK1Q99986 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK1Q99986 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.6□□□□□ -0.07
VRK1Q99986 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 AC211486.1-202ENST00000416371 468 ntBASIC14.6□□□□□ -0.07
VRK1Q99986 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 AC004967.1-201ENST00000453589 447 ntBASIC14.6□□□□□ -0.07
VRK1Q99986 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 AC211476.1-201ENST00000503899 468 ntBASIC14.6□□□□□ -0.07
VRK1Q99986 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.6□□□□□ -0.07
VRK1Q99986 AC005829.1-201ENST00000570002 483 ntBASIC14.6□□□□□ -0.07
VRK1Q99986 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.6□□□□□ -0.07
VRK1Q99986 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
VRK1Q99986 AC010507.1-201ENST00000633895 436 ntBASIC14.6□□□□□ -0.07
VRK1Q99986 AC007064.4-201ENST00000637740 555 ntBASIC14.6□□□□□ -0.07
VRK1Q99986 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VRK1Q99986 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VRK1Q99986 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK1Q99986 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK1Q99986 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VRK1Q99986 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
VRK1Q99986 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK1Q99986 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VRK1Q99986 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VRK1Q99986 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VRK1Q99986 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.59□□□□□ -0.07
VRK1Q99986 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK1Q99986 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 IGLL3P-201ENST00000412472 434 ntBASIC14.59□□□□□ -0.07
VRK1Q99986 MCCD1P2-201ENST00000423228 335 ntBASIC14.59□□□□□ -0.07
VRK1Q99986 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms