Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PGBD4Q96DM1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PGBD4Q96DM1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PGBD4Q96DM1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 AL031731.1-201ENST00000642131 2094 ntBASIC17.76■□□□□ 0.43
PGBD4Q96DM1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 CROCCP1-201ENST00000426910 5675 ntBASIC17.76■□□□□ 0.43
PGBD4Q96DM1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 MRPS18AP1-201ENST00000414458 589 ntBASIC17.76■□□□□ 0.43
PGBD4Q96DM1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 AL589702.1-201ENST00000641229 1509 ntBASIC17.76■□□□□ 0.43
PGBD4Q96DM1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD4Q96DM1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 AC087499.5-201ENST00000452760 1342 ntBASIC17.75■□□□□ 0.43
PGBD4Q96DM1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 AC015922.1-201ENST00000421102 1152 ntBASIC17.75■□□□□ 0.43
PGBD4Q96DM1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 AC026979.3-201ENST00000607315 403 ntBASIC17.75■□□□□ 0.43
PGBD4Q96DM1 TEX28P1-201ENST00000613479 1221 ntBASIC17.75■□□□□ 0.43
PGBD4Q96DM1 TEX28P2-201ENST00000617764 1221 ntBASIC17.75■□□□□ 0.43
PGBD4Q96DM1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD4Q96DM1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 AC084018.2-201ENST00000613093 2607 ntBASIC17.74■□□□□ 0.43
PGBD4Q96DM1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms