Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 FLJ38576-201ENST00000623820 2459 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 WASH6P-202ENST00000359512 1437 ntBASIC17.34■□□□□ 0.37
ATP2A3Q93084 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 FAM58DP-201ENST00000428076 619 ntBASIC17.34■□□□□ 0.37
ATP2A3Q93084 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 AL031055.1-201ENST00000606362 631 ntBASIC17.34■□□□□ 0.37
ATP2A3Q93084 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ATP2A3Q93084 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A3Q93084 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A3Q93084 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A3Q93084 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A3Q93084 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP2A3Q93084 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A3Q93084 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A3Q93084 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A3Q93084 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A3Q93084 SLC22A20-204ENST00000530038 1673 ntBASIC17.33■□□□□ 0.37
ATP2A3Q93084 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP2A3Q93084 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP2A3Q93084 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 RNU1-129P-201ENST00000384064 167 ntBASIC17.33■□□□□ 0.36
ATP2A3Q93084 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 PMS2P4-201ENST00000412466 1052 ntBASIC17.33■□□□□ 0.36
ATP2A3Q93084 U1.21-201ENST00000580816 167 ntBASIC17.33■□□□□ 0.36
ATP2A3Q93084 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 AC005498.2-205ENST00000593218 784 ntBASIC17.33■□□□□ 0.36
ATP2A3Q93084 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 AC018695.7-201ENST00000624587 2492 ntBASIC17.33■□□□□ 0.36
ATP2A3Q93084 RNF216P1-203ENST00000404404 2427 ntBASIC17.33■□□□□ 0.36
ATP2A3Q93084 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A3Q93084 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ATP2A3Q93084 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A3Q93084 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A3Q93084 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A3Q93084 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A3Q93084 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ATP2A3Q93084 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ATP2A3Q93084 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A3Q93084 UXT-AS1-201ENST00000590504 1525 ntBASIC17.32■□□□□ 0.36
ATP2A3Q93084 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A3Q93084 AL021920.2-201ENST00000624828 1351 ntBASIC17.32■□□□□ 0.36
ATP2A3Q93084 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms