Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 AP3S2-216ENST00000617003 1561 ntBASIC17.22■□□□□ 0.35
USP13Q92995 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
USP13Q92995 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.21■□□□□ 0.35
USP13Q92995 FOXO1B-201ENST00000504678 1527 ntBASIC17.21■□□□□ 0.35
USP13Q92995 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 AC106886.4-201ENST00000623557 2502 ntBASIC17.21■□□□□ 0.35
USP13Q92995 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.21■□□□□ 0.35
USP13Q92995 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.21■□□□□ 0.35
USP13Q92995 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 AC236430.1-201ENST00000402231 743 ntBASIC17.21■□□□□ 0.35
USP13Q92995 TSPY16P-201ENST00000449843 468 ntBASIC17.21■□□□□ 0.35
USP13Q92995 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
USP13Q92995 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.21■□□□□ 0.35
USP13Q92995 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.21■□□□□ 0.35
USP13Q92995 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.21■□□□□ 0.35
USP13Q92995 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 AC013467.2-201ENST00000605472 835 ntBASIC17.21■□□□□ 0.35
USP13Q92995 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.21■□□□□ 0.35
USP13Q92995 AC018529.1-201ENST00000613063 361 ntBASIC17.21■□□□□ 0.35
USP13Q92995 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP13Q92995 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
USP13Q92995 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.21■□□□□ 0.35
USP13Q92995 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
USP13Q92995 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
USP13Q92995 PCDHB19P-201ENST00000570871 2371 ntBASIC17.21■□□□□ 0.34
USP13Q92995 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
USP13Q92995 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
USP13Q92995 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP13Q92995 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
USP13Q92995 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
USP13Q92995 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.2■□□□□ 0.34
USP13Q92995 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.2■□□□□ 0.34
USP13Q92995 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.2■□□□□ 0.34
USP13Q92995 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.2■□□□□ 0.34
USP13Q92995 AC002472.2-201ENST00000442739 958 ntBASIC17.2■□□□□ 0.34
USP13Q92995 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.2■□□□□ 0.34
USP13Q92995 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 PRYP6-201ENST00000514804 343 ntBASIC17.2■□□□□ 0.34
USP13Q92995 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.2■□□□□ 0.34
USP13Q92995 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.2■□□□□ 0.34
USP13Q92995 RN7SL204P-201ENST00000582831 262 ntBASIC17.2■□□□□ 0.34
USP13Q92995 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.2■□□□□ 0.34
USP13Q92995 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.2■□□□□ 0.34
USP13Q92995 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
USP13Q92995 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP13Q92995 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.2■□□□□ 0.34
USP13Q92995 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP13Q92995 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP13Q92995 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
USP13Q92995 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP13Q92995 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP13Q92995 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP13Q92995 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP13Q92995 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.19■□□□□ 0.34
USP13Q92995 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP13Q92995 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms