Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 FO393414.2-201ENST00000405153 598 ntBASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 RRP7BP-205ENST00000566851 833 ntBASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 MIR4321-201ENST00000592276 80 ntBASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 U82695.1-201ENST00000635752 1889 ntBASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 CYP4F24P-201ENST00000586049 1580 ntBASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 AC139713.2-201ENST00000641328 2723 ntBASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.35■■□□□ 1.01
RAPGEF4Q8WZA2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 HIST3H2BA-201ENST00000436555 524 ntBASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AC022210.1-201ENST00000449856 793 ntBASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 WFDC1-204ENST00000613603 549 ntBASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 LINC01144-201ENST00000626198 1710 ntBASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPGEF4Q8WZA2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 TMEM14DP-201ENST00000422205 345 ntBASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms