Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 HLA-V-204ENST00000476601 1289 ntBASIC17.43■□□□□ 0.38
RNF135Q8IUD6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 AC009407.1-201ENST00000568958 598 ntBASIC17.43■□□□□ 0.38
RNF135Q8IUD6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 AC008738.7-201ENST00000609744 511 ntBASIC17.43■□□□□ 0.38
RNF135Q8IUD6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 AC106886.1-201ENST00000568660 600 ntBASIC17.42■□□□□ 0.38
RNF135Q8IUD6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 AC092053.1-201ENST00000605787 1936 ntBASIC17.42■□□□□ 0.38
RNF135Q8IUD6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF135Q8IUD6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 AC011495.1-201ENST00000498085 584 ntBASIC17.41■□□□□ 0.38
RNF135Q8IUD6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 AC007967.4-201ENST00000614700 386 ntBASIC17.41■□□□□ 0.38
RNF135Q8IUD6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF135Q8IUD6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 EGFEM1P-202ENST00000431685 1563 ntBASIC17.4■□□□□ 0.38
RNF135Q8IUD6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms