Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.27■□□□□ 0.03
CHMP1BQ7LBR1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AL021920.2-201ENST00000624828 1351 ntBASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 YBX2P1-201ENST00000394192 760 ntBASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AC010327.4-202ENST00000591484 748 ntBASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 AC010507.1-201ENST00000633895 436 ntBASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP1BQ7LBR1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 UPF3AP3-201ENST00000420996 769 ntBASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 FAM185BP-201ENST00000443595 716 ntBASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 PCDHB17P-201ENST00000539533 2393 ntBASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 AC025580.3-201ENST00000617932 1424 ntBASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP1BQ7LBR1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms