Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 COX11P1-201ENST00000489116 835 ntBASIC13.17□□□□□ -0.3
KHDC3LQ587J8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 AC073912.3-201ENST00000624414 853 ntBASIC13.17□□□□□ -0.3
KHDC3LQ587J8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KHDC3LQ587J8 AL353593.2-201ENST00000602529 1483 ntBASIC13.16□□□□□ -0.3
KHDC3LQ587J8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 SSR4P1-203ENST00000599569 2260 ntBASIC13.16□□□□□ -0.3
KHDC3LQ587J8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 AC125634.1-201ENST00000438758 1403 ntBASIC13.16□□□□□ -0.3
KHDC3LQ587J8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.16□□□□□ -0.3
KHDC3LQ587J8 GUSBP12-201ENST00000513727 720 ntBASIC13.16□□□□□ -0.3
KHDC3LQ587J8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 AC007686.3-201ENST00000619017 3487 ntBASIC13.16□□□□□ -0.3
KHDC3LQ587J8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 AC097637.2-201ENST00000624096 1997 ntBASIC13.16□□□□□ -0.3
KHDC3LQ587J8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.16□□□□□ -0.3
KHDC3LQ587J8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 PCDHA3-202ENST00000532566 4594 ntBASIC13.15□□□□□ -0.3
KHDC3LQ587J8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 GGT3P-204ENST00000453783 1664 ntBASIC13.15□□□□□ -0.3
KHDC3LQ587J8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
KHDC3LQ587J8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms