Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 ALOX12P2-203ENST00000570921 1945 ntBASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 AC108751.1-201ENST00000490852 363 ntBASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 SLC25A1P1-201ENST00000528351 927 ntBASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 AC008667.4-201ENST00000607370 168 ntBASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 AC027601.4-201ENST00000611259 610 ntBASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
PCGF3Q3KNV8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 AP000347.1-202ENST00000435868 847 ntBASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 IGHV3-65-201ENST00000523210 341 ntBASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 FAM197Y3-203ENST00000618346 717 ntBASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 DBET-201ENST00000630918 3363 ntBASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.64□□□□□ -0.07
PCGF3Q3KNV8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 AL391256.1-201ENST00000443260 1855 ntBASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 MIR574-201ENST00000385209 96 ntBASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 PRSS29P-201ENST00000440800 595 ntBASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 AC009947.1-201ENST00000444350 727 ntBASIC14.63□□□□□ -0.07
PCGF3Q3KNV8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms